GI-CoRE GSQ, GSB & IGM Joint Symposium
– Quantum, Informatics, Biology & Medicine –
– Quantum, Informatics, Biology & Medicine –
July 10 – 11, 2017
Faculty of Medicine, Hokkaido University
Graduate School of Information Science and Technology, Hokkaido University
Organized by:
Global Station for Quantum Medical Science and Engineering, Hokkaido
University
Global Station for Big Data and Cybersecurity, Hokkaido University
Institute for Genetic Medicine, Hokkaido University
Department of Radiation Oncology, School of Medicine, Stanford University
Program (Day 1)
Room A: “Quantum, Informatics, Biology & Medicine”
Monday, July 10, 2017 – Special Conference Hall, The Alumni Hall “Frate”
10:00 – 10:20
Hiroki Shirato (GSQ, Hokkaido University)
Opening Address: Quantum, Informatics, Biology and Medicine
Opening Address: Quantum, Informatics, Biology and Medicine
10:20 – 11:00
Shin-ichi Minato (GSB, Hokkaido Univresity)
The algorithmic techniques for processing large-scale combinatorial data and applications to real-life problems
The algorithmic techniques for processing large-scale combinatorial data and applications to real-life problems
11:00 – 11:10
Coffee
11:10 – 11:50
Massimo Piccardi (University of Technology Sydney/GSB)
Natural language processing and machine learning for healthcare data
Natural language processing and machine learning for healthcare data
11:50 – 12:30
Erqi Pollom (Stanford University/GSQ)
To randomize or not to randomize? Challenges with observational studies using “big data”
To randomize or not to randomize? Challenges with observational studies using “big data”
12:30 – 14:30
Lunch
– Highlights of Recent Research in GI-CoRE GSQ and Faculty of Medicine –
14:30 – 14:50
Anussara Prayongrat (School of Medicine, Hokkaido University)
Model-based Approach to Select A Radiotherapy Technology: Summary of GI-CoRE GSQ 4th Symposium toward International Consensus
Model-based Approach to Select A Radiotherapy Technology: Summary of GI-CoRE GSQ 4th Symposium toward International Consensus
14:50 – 15:05
Hidehisa Takahashi & Shigematsu Hatakeyama (Faculty of Medicine, Hokkaido
University)
Big data analysis in bioinformatics to address mechanism of gene expression
Big data analysis in bioinformatics to address mechanism of gene expression
15:05 – 15:25
Khin Khin Tha (GSQ, Hokkaido University)
Identification of Noninvasive Biomarkers for Glioblastoma: The Role of “Radiomics”
Identification of Noninvasive Biomarkers for Glioblastoma: The Role of “Radiomics”
15:25 – 15:50
Coffee
15:50 – 16:30
Hiroshi Hirata (IST, Hokkaido University)
Magnetic resonance of electron spins: Its application to oxygen mapping
Magnetic resonance of electron spins: Its application to oxygen mapping
16:30 – 17:10
John Canning (University of Technology Sydney/GSB)
Photonic Sensing Technologies for Medical Applications
Photonic Sensing Technologies for Medical Applications
17:10 – 17:30
Hiroki Arimura (GSB, Hokkaido Univresity)
Summary
Summary
Room B: “Radiation Biology School for Graduate Students”
Monday, July 10, 2017 – Common Seminar Room 2-1, Adminstration Bldg.
10:00 – 11:00
Amato Giaccia (Stanford University/GSQ)
Biology for Radiotherapy I
Biology for Radiotherapy I
11:10 – 12:10
Amato Giaccia (Stanford University/GSQ)
Biology for Radiotherapy II
Biology for Radiotherapy II
Program (Day 2)
Room A: “Quantum, Biology and Medicine”
Tuesday, July 11, 2017 – Special Conference Hall, The Alumni Hall “Frate”
10:20 – 10:30
Amato Giaccia (Stanford University/GSQ)
Opening Address
Opening Address
10:30 – 11:20
Ichio Aoki (QST)
Genetic variation in individual sensitivity to clinical radiotherapy
Genetic variation in individual sensitivity to clinical radiotherapy
11:20 – 11:30
Coffee
11:30 – 12:20
Masaaki Murakami (Institute for Genetic Medicine, Hokkaido University)
Gateway reflexes, a new paradigm of neuro-immune crosstalk
Gateway reflexes, a new paradigm of neuro-immune crosstalk
12:20 – 14:20
Lunch
14:20 – 14:35
Jin-Min Nam & Chi-Che Hsieh (GSQ Stanford Unit)
Molecular targets for suppression of cancer invasion
Molecular targets for suppression of cancer invasion
14:35 – 14:50
Sumito Yoshida & Tsukasa Seya (Department of Immunology, Hokkaido
University)
TLR3 adjuvant induces tumor regression in concert with radiation therapy in mouse tumor-implant models
TLR3 adjuvant induces tumor regression in concert with radiation therapy in mouse tumor-implant models
14:50 – 15:40
Yu Miao (Stanford University/GSQ)
Developing affinity based therapy for the treatment of metastatic cancer
Developing affinity based therapy for the treatment of metastatic cancer
15:40 – 16:00
Coffee
16:00 – 16:15
Yutaka Takahashi (Osaka University)
Radiobiological effectiveness in various sarcoma cell lines in particle beam irradiation
Radiobiological effectiveness in various sarcoma cell lines in particle beam irradiation
16:15 – 17:05
Quynh-Thu Le (Stanford University/GSQ)
Research on Radiation Oncology and Immunology
Research on Radiation Oncology and Immunology
17:05 – 17:30
Quynh-Thu Le (Stanford University/GSQ)
Summary and Closing Remarks
Summary and Closing Remarks
Room B: “Big-data Analysis, IoT and Bioinformatics”
Tuesday, July 11, 2017 – Conference Room 11-17, IST Bldg.
13:30 – 13:35
Hiroki Arimura (GSB, Hokkaido University)
Opening Remarks
Opening Remarks
13:35 – 13:48
Kousuke Fukui and Akihisa Tomita (Laboratory of Optical Processing and
Networking, IST, Hokkaido University)
Analog quantum error correction on encoded qubits for large scale quantum computers
Analog quantum error correction on encoded qubits for large scale quantum computers
13:48 – 14:01
Kenta Ishihara, Takahiro Ogawa and Miki Haseyama (Laboratory of Media
Dynamics, IST, Hokkaido University)
Detection of Gastric Cancer Risk from X-ray Images based on Machine Learning
Detection of Gastric Cancer Risk from X-ray Images based on Machine Learning
14:01 – 14:14
Keisuke Maeda, Sho Takahashi, Takahiro Ogawa and Miki Haseyama
(Laboratory of Media Dynamics, IST, Hokkaido University, Hokkaido
University)
Deterioration Level Estimation on Transmission Towers based on Machine Learning
Deterioration Level Estimation on Transmission Towers based on Machine Learning
14:14 – 14:27
Ren Togo, Kenta Ishihara, Takahiro Ogawa and Miki Haseyama (Laboratory of
Media Dynamics, IST, Hokkaido University)
Estimation of regions related to Helicobacter pylori infection from gastric X-ray images
Estimation of regions related to Helicobacter pylori infection from gastric X-ray images
14:27 – 14:40
Namo Podee, Yoshinori Dobashi and Tsuyoshi Yamamoto (Laboratory of
Information Media Environment, IST, Hokkaido University)
GPU Adaptive Path Tracing without Atomic Instruction
GPU Adaptive Path Tracing without Atomic Instruction
14:40 – 14:53
Hongjie Zhai and Makoto Haraguchi (Knowledge-Base Laboratory, IST,
Hokkaido University)
Guessing Associated Features by Non-negative Tri-Factorization
Guessing Associated Features by Non-negative Tri-Factorization
14:53 – 15:03
Coffee
15:03 – 15:16
Myat Hsu Aung, Hiroshi Tsutsui and Yoshikazu Miyanaga (Laboratory of
Information Communication Networks, IST, Hokkaido University)
An Implementation of WiFi Based Indoor Positioning System Using Estimated Reference Locations
An Implementation of WiFi Based Indoor Positioning System Using Estimated Reference Locations
15:16 – 15:29
Itaru Hida, Masayuki Ikebe and Tetsuya Asai (Laboratory for Integrated
NanoSystem, IST, Hokkaido University)
Shinya Takamaeda-Yamazaki and Masato Motomura (Laboratory for Integrated Digital System Architecture, IST, Hokkaido University)
A Versatile and Energy-Efficient Reconfigurable Accelerator for Embedded Microprocessors
Shinya Takamaeda-Yamazaki and Masato Motomura (Laboratory for Integrated Digital System Architecture, IST, Hokkaido University)
A Versatile and Energy-Efficient Reconfigurable Accelerator for Embedded Microprocessors
15:29 – 15:42
Kodai Ueyoshi, Shinya Takamaeda-Yamazaki and Masato Motomura (Laboratory
for Integrated Digital System Architecture, IST, Hokkaido University)
Masayuki Ikebe and Tetsuya Asai (Laboratory for Integrated NanoSystem, IST, Hokkaido University)
Hardware Accelerator Design for Convolutional Neural Networks with low bit precision
Masayuki Ikebe and Tetsuya Asai (Laboratory for Integrated NanoSystem, IST, Hokkaido University)
Hardware Accelerator Design for Convolutional Neural Networks with low bit precision
15:42 – 15:55
Xiaoxiong Xing, Yoshinori Dobashi and Tsuyoshi Yamamoto (Laboratory of
Information Media Environment, IST, Hokkaido University)
Learning interior design using convolutional neural networks
Learning interior design using convolutional neural networks
15:55 – 16:08
Kasho Yamamoto, Shinya Takamaeda-Yamazaki and Masato Motomura (Laboratory
for Integrated Digital System Architecture, IST, Hokkaido University)
Masayuki Ikebe and Tetsuya Asai (Laboratory for Integrated NanoSystem, IST, Hokkaido University)Time-Division Multiplexing Ising Machine on FPGAs
Masayuki Ikebe and Tetsuya Asai (Laboratory for Integrated NanoSystem, IST, Hokkaido University)Time-Division Multiplexing Ising Machine on FPGAs
16:08 – 16:18
Coffee
16:18 – 16:31
Keito Aoki, Kanako Koyanagi and Hidemi Watanabe (Laboratory of Genome
Sciences, IST, Hokkaido University)
Error detection and classifying mixed genomes methods for next generation sequencing based on the characteristics of reads orientation
Error detection and classifying mixed genomes methods for next generation sequencing based on the characteristics of reads orientation
16:31 – 16:44
Sangeetha Ratnayake, Toshinori Endo and Naoki Osada (Information Biology
Laboratory, IST, Hokkaido University)
Amino Acid Exchangeability and Disease-causing Ability in Human Beta Globin Gene
Amino Acid Exchangeability and Disease-causing Ability in Human Beta Globin Gene
16:44 – 16:57
Dai Watabe, Naoki Osada and Toshinori Endo (Information Biology
Laboratory, IST, Hokkaido University)
Hiroshi YUASA (The Research Institute of Evolutionary Biology)
American Traditional Bottle Gourds Possessed Hybrid DNA in the Nucleus and Chloroplasts: Alternative Scenario for Ancient Propagation of Lagenaria siceraria
Hiroshi YUASA (The Research Institute of Evolutionary Biology)
American Traditional Bottle Gourds Possessed Hybrid DNA in the Nucleus and Chloroplasts: Alternative Scenario for Ancient Propagation of Lagenaria siceraria
16:57 – 17:02
Hiroki Arimura (GSB, Hokkaido University)
Concluding Remarks
Concluding Remarks
Number of Participants
July 10 (Room A, B):
98 researchers/students
July 11 (Room A):
105 researchers/students
July 11 (Room B):
48 researchers/students
Acronyms
IST:
Graduate School of Information Science and Technology
GI-CoRE:
Global Institution for Collaborative Research and Education
GSQ:
Global Station for Quantum Medical Science and Engineering
GSB:
Global Station for Big Data and Cybersecurity
IGM:
Institute for Genetic Medicine